eggnog mapper | eggNOG-mapper

Keyword	CPC	PCC	Volume	Score	Length of keyword
eggnog mapper	0.05	0.5	5319	6	13
eggnog	0.6	0.1	7153	30	6
mapper	1.45	0.2	8940	77	6

Keyword	CPC	PCC	Volume	Score
eggnog mapper	1.5	0.6	3953	45
eggnog mapper github	0.2	0.2	4056	55
eggnog mapper conda	0.65	0.2	2629	13
eggnog mapper to ko	1.69	0.4	7098	68
eggnog mapper v2	1.37	0.5	4310	14
eggnog mapper install	1.42	0.2	7528	88
eggnog mapper output	0.7	0.8	8970	70
eggnog mapper web	0.48	0.2	6527	89
eggnog mapper tutorial	0.46	0.8	8009	4

Search Results related to eggnog mapper on Search Engine

eggNOG-mapper
embl.de

http://eggnog-mapper.embl.de/

WEBeggNOG-mapper 2.1.9 just released! and it is running at eggNOG-mapper web, now including a new option to search against the novel families from Rodríguez et al 2022 ("Advanced Options" -> "Database" -> "Novel families") 22-Oct-2021 - New blastx-like search options for genomic and metagenomic sequences

DA: 65 PA: 58 MOZ Rank: 47

GitHub - eggnogdb/eggnog-mapper: Fast genome-wide …
github.com

https://github.com/eggnogdb/eggnog-mapper

WEBEggNOG-mapper is a tool for fast functional annotation of novel sequences. It uses precomputed orthologous groups and phylogenies from the eggNOG database (http://eggnog5.embl.de) to transfer functional information from fine-grained orthologs only.

DA: 28 PA: 100 MOZ Rank: 97

Releases · eggnogdb/eggnog-mapper · GitHub
github.com

https://github.com/eggnogdb/eggnog-mapper/releases

WEBeggnogdb / eggnog-mapper Public. Notifications. Fork 104. Star 531. Aug 18, 2023. Cantalapiedra. 2.1.12. 3abb35c. Compare. Release v2.1.12 Latest. Updated novel families DB version and added novel families .pkl DB for annotation, which can be downloaded from http://eggnog6.embl.de/download/novel_fams-1.0.1 or using download_eggnog_data.py …

DA: 64 PA: 100 MOZ Rank: 23

EggNOG Database | Orthology predictions and functional …
embl.de

http://eggnog5.embl.de/

WEBeggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses.

DA: 28 PA: 13 MOZ Rank: 72

eggNOG-mapper: fast genome-wide functional annotation …
nih.gov

https://hpc.nih.gov/apps/eggNOGmapper.html

WEBeggNOG-mapper is a tool for functional annotation of large sets of sequences based on fast orthology assignments using precomputed clusters and phylogenies from the eggNOG database. Orthology assignment is ideally suited for functional inference.

DA: 27 PA: 11 MOZ Rank: 58

eggNOG-mapper v2: Functional Annotation, Orthology …
nih.gov

https://pubmed.ncbi.nlm.nih.gov/34597405/

WEBDec 9, 2021 · Most notably, eggNOG-mapper v2 now allows for: 1) de novo gene prediction from raw contigs, 2) built-in pairwise orthology prediction, 3) fast protein domain discovery, and 4) automated GFF decoration. eggNOG-mapper v2 is available as a standalone tool or as an online service at http://eggnog-mapper.embl.de.

DA: 35 PA: 12 MOZ Rank: 95

EggNOG Database | Orthology predictions and functional …
embl.de

http://eggnog45.embl.de/

WEBA number of new features have been added to the web interface: Fast ID searching, inline visualization of trees, alignments and taxonomic profiles. Gene Ontology and protein domain frequencies. Orthology predictions grouped by species and automatically adjusted to queries, and more!

DA: 12 PA: 93 MOZ Rank: 14

eggNOG-mapper v2: Functional Annotation, Orthology ... - bioRxiv
biorxiv.org

https://www.biorxiv.org/content/10.1101/2021.06.03.446934v1

WEBJun 3, 2021 · Most notably, eggNOG-mapper v2 now allows: (i) de novo gene prediction from raw contigs, (ii) built-in pairwise orthology prediction, (iii) fast protein domain discovery, and (iv) automated GFF decoration. eggNOG-mapper v2 is available as a standalone tool or as an online service at http://emapperdev.compgenomics.org. Competing Interest …

DA: 16 PA: 77 MOZ Rank: 18

eggnog-mapper/README.md at master - GitHub
github.com

https://github.com/eggnogdb/eggnog-mapper/blob/master/README.md

WEBOverview. EggNOG-mapper is a tool for fast functional annotation of novel sequences. It uses precomputed orthologous groups and phylogenies from the eggNOG database ( …

DA: 84 PA: 2 MOZ Rank: 54

eggnog-mapper · PyPI
pypi.org

https://pypi.org/project/eggnog-mapper/

WEBFeb 1, 2012 · Overview. EggNOG-mapper is a tool for fast functional annotation of novel sequences. It uses precomputed orthologous groups and phylogenies from the eggNOG database ( http://eggnog5.embl.de) to transfer functional information from fine …

DA: 5 PA: 92 MOZ Rank: 44